Professorial fellow, Institute of Cell, Animal and Population Biology, NERC Senior Research Fellow

Research interests
Plant evolutionary and population genetics, particularly topics in the general area of the evolution of plant breeding systems, including avoidance of inbreeding and the genetic basis of dioecy (unisexual male and female flowers on separate individuals), sex chromosomes, and self-incompatibility

Editorial boards: Heredity, Genetics, Molecular Ecology

Divergence time of the two regional medaka populations in Japan as a new time scale for comparative genomics of vertebrates. Setiamarga DH, Miya M, …, Mabuchi K, Nishida M Biol Lett 2009 Dec 23 5(6):812-6 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 1 Mar 2010 Genome sequencing and analysis of the model grass Brachypodium distachyon. Vogel JP, Garvin DF, …, Chalhoub B, Baxter I Nature 2010 Feb 11 463(7282):763-8 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 1 Mar 2010 Segregation distortion and the evolution of sex-determining mechanisms. Kozielska M, Weissing FJ, Beukeboom LW, Pen I Heredity 2010 Jan 104(1):100-12 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 29 Jan 2010 The emergence of new genes on the young therian X. Potrzebowski L, Vinckenbosch N, Kaessmann H Trends Genet 2009 Nov 19 [abstract on PubMed] [related articles] [full text] Selected by | Deborah Charlesworth Evaluated 22 Jan 2010 Epigenetic silencing of transposable elements: a trade-off between reduced transposition and deleterious effects on neighboring gene expression. Hollister JD, Gaut BS Genome Res 2009 Aug 19(8):1419-28 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Arjun Krishnan and Andy Pereira / Magnus Nordborg / Deborah Charlesworth Evaluated 16 Oct 2009 Sperm length is not influenced by haploid gene expression in the flies Drosophila melanogaster and Scathophaga stercoraria. Pitnick S, Dobler R, Hosken DJ Proc Biol Sci 2009 Aug 26 [abstract on PubMed] [related articles] [full text] Selected by | Deborah Charlesworth Evaluated 16 Oct 2009 Footprints of inversions at present and past pseudoautosomal boundaries in human sex chromosomes. Lemaitre C, Braga MDV, …, Tannier E, Marais GAB Genome Biol Evol 2009 56 [full text] Selected by | Deborah Charlesworth Evaluated 16 Oct 2009 Detecting heterozygosity in shotgun genome assemblies: Lessons from obligately outcrossing nematodes. Barrière A, Yang SP, …, Haag ES, Ruvinsky I Genome Res 2009 Mar 19(3):470-80 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 18 Aug 2009 Identification of the pollen self-incompatibility determinant in Papaver rhoeas. Wheeler MJ, de Graaf BH, …, Franklin FC, Franklin-Tong VE Nature 2009 Jun 18 459(7249):992-5 [abstract on PubMed] [related articles] [full text] [order article] Selected by | David Smyth / Deborah Charlesworth Evaluated 9 Jul 2009 High-resolution mapping of the S-locus in Turnera leads to the discovery of three genes tightly associated with the S-alleles. Labonne JJ, Goultiaeva A, Shore JS Mol Genet Genomics 2009 Jun 281(6):673-85 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 9 Jul 2009 Recent speciation of Capsella rubella from Capsella grandiflora, associated with loss of self-incompatibility and an extreme bottleneck. Guo YL, Bechsgaard JS, …, Weigel D, Schierup MH Proc Natl Acad Sci U S A 2009 Mar 31 106(13):5246-51 [abstract on PubMed] [related articles] [FREE full text] Selected by | Bao-Hua Song and Thomas Mitchell-Olds / Deborah Charlesworth / Adrien Sicard and Michael Lenhard Evaluated 23 Apr 2009 Mitochondrial DNA of Vitis vinifera and the issue of rampant horizontal gene transfer. Goremykin VV, Salamini F, Velasco R, Viola R Mol Biol Evol 2009 Jan 26(1):99-110 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 20 Feb 2009 Rapid evolution of Cse4p-rich centromeric DNA sequences in closely related pathogenic yeasts, Candida albicans and Candida dubliniensis. Padmanabhan S, Thakur J, Siddharthan R, Sanyal K Proc Natl Acad Sci U S A 2008 Dec 16 105(50):19797-802 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 6 Feb 2009 Divergent evolution of duplicate genes leads to genetic incompatibilities within A. thaliana. Bikard D, Patel D, …, Bennett MJ, Loudet O Science 2009 Jan 30 323(5914):623-6 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Julin Maloof / Deborah Charlesworth / Yves Van de Peer / Mohamed Noor Evaluated 5 Feb 2009 Genetic mapping of sex determination in a wild strawberry, Fragaria virginiana, reveals earliest form of sex chromosome. Spigler RB, Lewers KS, Main DS, Ashman TL Heredity 2008 Dec 101(6):507-17 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 4 Dec 2008 Evolutionary steps of sex chromosomes are reflected in retrogenes. McLysaght A Trends Genet 2008 Oct 24(10):478-81 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 3 Dec 2008 Detection of sharing by descent, long-range phasing and haplotype imputation. Kong A, Masson G, …, Stefansson H, Stefansson K Nat Genet 2008 Aug 17 40 [abstract on PubMed] [related articles] [full text] Selected by | Deborah Charlesworth Evaluated 29 Oct 2008 Outbreeding alleviates senescence in hermaphroditic snails as expected from the mutation-accumulation theory. Escobar JS, Jarne P, Charmantier A, David P Curr Biol 2008 Jun 24 18(12):906-10 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 25 Jul 2008 Extreme heterochiasmy and nascent sex chromosomes in European tree frogs. Berset-Brändli L, Jaquiéry J, …, Ulrich Y, Perrin N Proc Biol Sci 2008 Jul 7 275(1642):1577-85 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 30 Jun 2008 Comparative chromosome mapping of sex-linked genes and identification of sex chromosomal rearrangements in the Japanese wrinkled frog (Rana rugosa, Ranidae) with ZW and XY sex chromosome systems. Uno Y, Nishida C, …, Matsuda Y, Nakamura M Chromosome Res 2008 May 20 [abstract on PubMed] [related articles] [full text] Selected by | Deborah Charlesworth Evaluated 27 May 2008 Recombination and linkage disequilibrium among mitochondrial genes in structured populations of the gynodioecious plant Silene vulgaris. McCauley DE, Ellis JR Evolution Int J Org Evolution 2008 Apr 62(4):823-32 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 27 May 2008 Genetic and physical maps around the sex-determining M-locus of the dioecious plant asparagus. Telgmann-Rauber A, Jamsari A, …, Pires JC, Jung C Mol Genet Genomics 2007 Sep 278(3):221-34 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 27 May 2008 Biased clustered substitutions in the human genome: the footprints of male-driven biased gene conversion. Dreszer TR, Wall GD, Haussler D, Pollard KS Genome Res 2007 Oct 17(10):1420-30 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 6 Feb 2008 Dosage compensation in the mouse balances up-regulation and silencing of X-linked genes. Lin H, Gupta V, …, O'Neill LP, Turner BM PLoS Biol 2007 Dec 5(12):e326 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 6 Feb 2008 The population genetics of mimetic diversity in Heliconius butterflies. Kronforst MR, Gilbert LE Proc Biol Sci 2008 Mar 7 275(1634):493-500 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Michael Bonsall / Deborah Charlesworth Evaluated 6 Feb 2008 Ultraconservation identifies a small subset of extremely constrained developmental enhancers. Visel A, Prabhakar S, …, Rubin EM, Pennacchio LA Nat Genet 2008 Feb 40(2):158-60 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Hans van Bokhoven / Deborah Charlesworth Evaluated 6 Feb 2008 Limited performance of DNA barcoding in a diverse community of tropical butterflies. Elias M, Hill RI, …, Mallet J, Jiggins CD Proc Biol Sci 2007 Nov 22 274(1627):2881-9 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 13 Nov 2007 Low X/Y divergence in four pairs of papaya sex-linked genes. Yu Q, Hou S, …, Paterson AH, Ming R Plant J 2008 Jan 53(1):124-32 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 13 Nov 2007 Viral epizootic reveals inbreeding depression in a habitually inbreeding mammal. Ross-Gillespie A, O'Riain MJ, Keller LF Evolution Int J Org Evolution 2007 Sep 61(9):2268-73 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 13 Nov 2007 Self-incompatibility of Prunus tenella and evidence that reproductively isolated species of Prunus have different SFB alleles coupled with an identical S-RNase allele. Surbanovski N, Tobutt KR, …, Stevanović V, Bosković RI Plant J 2007 May 50(4):723-34 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 11 Jun 2007 The evolutionary history of human DNA transposons: evidence for intense activity in the primate lineage. Pace JK, Feschotte C Genome Res 2007 Apr 17(4):422-32 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 11 Jun 2007 Simultaneous amino acid substitutions at antigenic sites drive influenza A hemagglutinin evolution. Shih AC, Hsiao TC, Ho MS, Li WH Proc Natl Acad Sci U S A 2007 Apr 10 104(15):6283-8 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 11 Jun 2007 Computational and experimental approaches double the number of known introns in the pathogenic yeast Candida albicans. Mitrovich QM, Tuch BB, Guthrie C, Johnson AD Genome Res 2007 Apr 17(4):492-502 [abstract on PubMed] [related articles] [FREE full text] Selected by | Juergen Wendland / Deborah Charlesworth / Paula Sundstrom Evaluated 8 Jun 2007 Incipient speciation by divergent adaptation and antagonistic epistasis in yeast. Dettman JR, Sirjusingh C, Kohn LM, Anderson JB Nature 2007 May 31 447(7144):585-8 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth / Richard Frankham Evaluated 7 Jun 2007 Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers. Miller MR, Dunham JP, …, Cresko WA, Johnson EA Genome Res 2007 Feb 17(2):240-8 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 19 Mar 2007 Evidence for large inversion polymorphisms in the human genome from HapMap data. Bansal V, Bashir A, Bafna V Genome Res 2007 Feb 17(2):219-30 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 19 Mar 2007 Evolution of the complementary sex-determination gene of honey bees: balancing selection and trans-species polymorphisms. Cho S, Huang ZY, …, Smith DR, Zhang J Genome Res 2006 Nov 16(11):1366-75 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 14 Dec 2006 On the varied pattern of evolution of 2 fungal genomes: a critique of Hughes and Friedman. Yang Z Mol Biol Evol 2006 Dec 23:2279-82 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 14 Dec 2006 Doubling genome size without polyploidization: dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice. Piegu B, Guyot R, …, Wing RA, Panaud O Genome Res 2006 Oct 16(10):1262-9 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marie-Angele Grandbastien / Richard Flavell / Deborah Charlesworth Evaluated 14 Dec 2006 Effects of trans-acting genetic modifiers on meiotic recombination across the a1-sh2 interval of maize. Yandeau-Nelson MD, Nikolau BJ, Schnable PS Genetics 2006 Sep 174(1):101-12 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 27 Oct 2006 Positive selection can create false hotspots of recombination. Reed FA, Tishkoff SA Genetics 2006 Mar 172(3):2011-4 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 2 Jun 2006 Reorganization of adjacent gene relationships in yeast genomes by whole-genome duplication and gene deletion. Byrnes JK, Morris GP, Li WH Mol Biol Evol 2006 Jun 23(6):1136-43 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 2 Jun 2006 The hitchhiking effect on linkage disequilibrium between linked neutral loci. Stephan W, Song YS, Langley CH Genetics 2006 Apr 172(4):2647-63 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 2 Jun 2006 Concerted evolution of two novel protein families in Caenorhabditis species. Thomas JH Genetics 2006 Apr 172(4):2269-81 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 2 Jun 2006 Cloning and sequence analysis of the MAT-B (MAT-2) genes from the three Dutch elm disease pathogens, Ophiostoma ulmi, O. novo-ulmi, and O. himal-ulmi. Paoletti M, Buck KW, Brasier CM Mycol Res 2005 Sep 109(Pt 9):983-91 [abstract on PubMed] [related articles] [order article] Selected by | Deborah Charlesworth Evaluated 9 Feb 2006 Rate asymmetry after genome duplication causes substantial long-branch attraction artifacts in the phylogeny of Saccharomyces species. Fares MA, Byrne KP, Wolfe KH Mol Biol Evol 2006 Feb 23(2):245-53 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 9 Feb 2006 Extent of gene duplication in the genomes of Drosophila, nematode, and yeast. Gu Z, Cavalcanti A, …, Bouman P, Li WH Mol Biol Evol 2002 Mar 19(3):256-62 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 7 Feb 2006 Role of duplicate genes in genetic robustness against null mutations. Gu Z, Steinmetz LM, …, Davis RW, Li WH Nature 2003 Jan 2 421(6918):63-6 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Mohamed Noor / Patricia Simpson / Mark Nelson / Deborah Charlesworth Evaluated 7 Feb 2006 The evolution of recombination under domestication: a test of two hypotheses. Ross-Ibarra J Am Nat 2004 Jan 163(1):105-12 [abstract on PubMed] [related articles] [order article] Selected by | Gregory Copenhaver / Deborah Charlesworth Evaluated 7 Feb 2006 Comparative genomics reveals expansion of the FLC region in the genus Arabidopsis. Sanyal A, Jackson SA Mol Genet Genomics 2006 Jan 275(1):26-34 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 4 Jan 2006 Subdivision of large introns in Drosophila by recursive splicing at nonexonic elements. Burnette JM, Miyamoto-Sato E, …, Conklin J, Lopez AJ Genetics 2005 Jun 170(2):661-74 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 8 Nov 2005 Recombination enhances protein adaptation in Drosophila melanogaster. Presgraves DC Curr Biol 2005 Sep 20 15(18):1651-6 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 8 Nov 2005 Ancient haplotypes of the HLA Class II region. Raymond CK, Kas A, …, Kaul R, Olson MV Genome Res 2005 Sep 15(9):1250-7 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 9 Sep 2005 Ectopic gene conversions increase the G + C content of duplicated yeast and Arabidopsis genes. Benovoy D, Morris RT, Morin A, Drouin G Mol Biol Evol 2005 Sep 22(9):1865-8 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 23 Aug 2005 The evolution of reproductive systems and sex-determining mechanisms within rumex (polygonaceae) inferred from nuclear and chloroplastidial sequence data. Navajas-Pérez R, de la Herrán R, …, Ruiz Rejón M, Garrido-Ramos MA Mol Biol Evol 2005 Sep 22(9):1929-39 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 18 Aug 2005 The probability and chromosomal extent of trans-specific polymorphism. Wiuf C, Zhao K, Innan H, Nordborg M Genetics 2004 Dec 168(4):2363-72 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 6 May 2005 Very low gene duplication rate in the yeast genome. Gao LZ, Innan H Science 2004 Nov 19 306(5700):1367-70 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 6 May 2005 Rapid evolution of the MH class I locus results in different allelic compositions in recently diverged populations of Atlantic salmon. Consuegra S, Megens HJ, …, Stet RJ, Jordan WC Mol Biol Evol 2005 Apr 22(4):1095-106 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 6 May 2005 Duplication of the S-locus F-box gene is associated with breakdown of pollen function in an S-haplotype identified in a natural population of self-incompatible Petunia axillaris. Tsukamoto T, Ando T, …, Marchesi E, Kao TH Plant Mol Biol 2005 Jan 57(1):141-53 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 6 May 2005 Approaching the self-incompatibility locus Z in rye (Secale cereale L.) via comparative genetics. Hackauf B, Wehling P Theor Appl Genet 2005 Mar 110(5):832-45 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 6 May 2005 Extensive interallelic polymorphisms drive meiotic recombination into a crossover pathway. Dooner HK Plant Cell 2002 May 14(5):1173-83 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 1 Nov 2004 Natural variation in expression of self-incompatibility in Arabidopsis thaliana: implications for the evolution of selfing. Nasrallah ME, Liu P, …, Boggs NA, Nasrallah JB Proc Natl Acad Sci U S A 2004 Nov 9 101(45):16070-4 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 29 Oct 2004 Pattern of polymorphism after strong artificial selection in a domestication event. Innan H, Kim Y Proc Natl Acad Sci U S A 2004 Jul 20 101(29):10667-72 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 30 Jul 2004 A microsatellite-based linkage map of the honeybee, Apis mellifera L. Solignac M, Vautrin D, …, Loiseau A, Cornuet JM Genetics 2004 May 167(1):253-62 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 29 Jul 2004 Complete MHC haplotype sequencing for common disease gene mapping. Stewart CA, Horton R, …, Trowsdale J, Beck S Genome Res 2004 Jun 14(6):1176-87 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 23 Jun 2004 Ultraconserved elements in the human genome. Bejerano G, Pheasant M, …, Mattick JS, Haussler D Science 2004 May 28 304(5675):1321-5 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Deborah Charlesworth / Richard L Stevens / Golan Yona Evaluated 23 Jun 2004 Mutational bias affects protein evolution in flowering plants. Wang HC, Singer GA, Hickey DA Mol Biol Evol 2004 Jan 21(1):90-6 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 1 Apr 2004 High MHC diversity maintained by balancing selection in an otherwise genetically monomorphic mammal. Aguilar A, Roemer G, …, Garcelon D, Wayne RK Proc Natl Acad Sci U S A 2004 Mar 9 101(10):3490-4 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 1 Apr 2004 Sequencing of a rice centromere uncovers active genes. Nagaki K, Cheng Z, …, Buell CR, Jiang J Nat Genet 2004 Feb 36(2):138-45 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth / Renate Schmidt Evaluated 1 Apr 2004 The early stages of duplicate gene evolution. Moore RC, Purugganan MD Proc Natl Acad Sci U S A 2003 Dec 23 100(26):15682-7 [abstract on PubMed] [related articles] [FREE full text] Selected by | Jeff Doyle / Deborah Charlesworth Evaluated 28 Jan 2004 A primitive Y chromosome in papaya marks incipient sex chromosome evolution. Liu Z, Moore PH, …, Paterson AH, Ming R Nature 2004 Jan 22 427(6972):348-52 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 28 Jan 2004 Pattern of diversity in the genomic region near the maize domestication gene tb1. Clark RM, Linton E, Messing J, Doebley JF Proc Natl Acad Sci U S A 2004 Jan 20 101(3):700-7 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 27 Jan 2004 Genome-level evolution of resistance genes in Arabidopsis thaliana. Baumgarten A, Cannon S, Spangler R, May G Genetics 2003 Sep 165(1):309-19 [abstract on PubMed] [related articles] [FREE full text] Selected by | Michael Purugganan / Deborah Charlesworth Evaluated 20 Nov 2003 Theory of the effects of population structure and sampling on patterns of linkage disequilibrium applied to genomic data from humans. Wakeley J, Lessard S Genetics 2003 Jul 164(3):1043-53 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 18 Nov 2003 Conserved noncoding sequences in the grasses. Inada DC, Bashir A, …, Goff SA, Freeling M Genome Res 2003 Sep 13(9):2030-41 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth / Detlef Weigel Evaluated 15 Sep 2003 A selective sweep driven by pyrimethamine treatment in southeast asian malaria parasites. Nair S, Williams JT, …, Nosten F, Anderson TJ Mol Biol Evol 2003 Sep 20(9):1526-36 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 15 Sep 2003 Comparative analysis of the Arabidopsis pollen transcriptome. Honys D, Twell D Plant Physiol 2003 Jun 132(2):640-52 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 30 Jul 2003 Large-scale comparison of intron positions in mammalian genes shows intron loss but no gain. Roy SW, Fedorov A, Gilbert W Proc Natl Acad Sci U S A 2003 Jun 10 100(12):7158-62 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 29 Jul 2003 Divergence in the spatial pattern of gene expression between human duplicate genes. Makova KD, Li WH Genome Res 2003 Jul 13(7):1638-45 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 29 Jul 2003 Cryptic species of fig-pollinating wasps: implications for the evolution of the fig-wasp mutualism, sex allocation, and precision of adaptation. Molbo D, Machado CA, …, Keller L, Herre EA Proc Natl Acad Sci U S A 2003 May 13 100(10):5867-72 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 7 Jul 2003 Adaptive evolution drives divergence of a hybrid inviability gene between two species of Drosophila. Presgraves DC, Balagopalan L, Abmayr SM, Orr HA Nature 2003 Jun 12 423(6941):715-9 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth / Richard Lenski / Mohamed Noor / Elizabeth Kellogg Evaluated 30 Jun 2003 Balancing selection at the prion protein gene consistent with prehistoric kurulike epidemics. Mead S, Stumpf MP, …, Fisher EM, Collinge J Science 2003 Apr 25 300(5619):640-3 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 3 Jun 2003 Amino acid variant in the kinase binding domain of dual-specific A kinase-anchoring protein 2: a disease susceptibility polymorphism. Kammerer S, Burns-Hamuro LL, …, Taylor SS, Braun A Proc Natl Acad Sci U S A 2003 Apr 1 100(7):4066-71 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 22 Apr 2003 Structural and transcriptional analysis of the self-incompatibility locus of almond: identification of a pollen-expressed F-box gene with haplotype-specific polymorphism. Ushijima K, Sassa H, …, Tao R, Hirano H Plant Cell 2003 Mar 15(3):771-81 [abstract on PubMed] [related articles] [FREE full text] Selected by | Sheila McCormick / Deborah Charlesworth Evaluated 17 Mar 2003 A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome. Blanc G, Hokamp K, Wolfe KH Genome Res 2003 Feb 13(2):137-44 [abstract on PubMed] [related articles] [FREE full text] Selected by | Thomas Mitchell-Olds / Deborah Charlesworth Evaluated 18 Feb 2003 The Y chromosome of Drosophila melanogaster exhibits chromosome-wide imprinting. Maggert KA, Golic KG Genetics 2002 Nov 162(3):1245-58 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 13 Jan 2003 Single mutations silence PGiC2 genes in two very recent allotetraploid species of Clarkia. Ford VS, Gottlieb LD Evolution Int J Org Evolution 2002 Apr 56(4):699-707 [abstract on PubMed] [related articles] [order article] Selected by | Deborah Charlesworth Evaluated 13 Jan 2003 Recombination rates between adjacent genic and retrotransposon regions in maize vary by 2 orders of magnitude. Fu H, Zheng Z, Dooner HK Proc Natl Acad Sci U S A 2002 Jan 22 99(2):1082-7 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marie-Angele Grandbastien / Deborah Charlesworth Evaluated 21 Nov 2002 Reciprocal crossover asymmetry and meiotic drive in a human recombination hot spot. Jeffreys AJ, Neumann R Nat Genet 2002 Jul 31(3):267-71 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 19 Nov 2002 Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus. Martin W, Rujan T, …, Hasegawa M, Penny D Proc Natl Acad Sci U S A 2002 Sep 17 99(19):12246-51 [abstract on PubMed] [related articles] [FREE full text] Selected by | Michael Purugganan / Jonathan A Eisen / Deborah Charlesworth / Renate Schmidt / Debashish Bhattacharya Evaluated 8 Oct 2002 Insights into the evolution of self-compatibility in Lycopersicon from a study of stylar factors. Kondo K, Yamamoto M, …, Hattori T, Kowyama Y Plant J 2002 Apr 30(2):143-53 [abstract on PubMed] [related articles] [order article] Selected by | Deborah Charlesworth Evaluated 8 Oct 2002 Recent segmental duplications in the human genome. Bailey JA, Gu Z, …, Li PW, Eichler EE Science 2002 Aug 9 297(5583):1003-7 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth / Stephan Beck / Magnus Nordborg Evaluated 30 Aug 2002 MHC heterozygosity confers a selective advantage against multiple-strain infections. Penn DJ, Damjanovich K, Potts WK Proc Natl Acad Sci U S A 2002 Aug 20 99(17):11260-4 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 30 Aug 2002 The evolution of the heat-shock protein GroEL from Buchnera, the primary endosymbiont of aphids, is governed by positive selection. Fares MA, Barrio E, Sabater-Muñoz B, Moya A Mol Biol Evol 2002 Jul 19(7):1162-70 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 25 Jul 2002 Essential genes are more evolutionarily conserved than are nonessential genes in bacteria. Jordan IK, Rogozin IB, Wolf YI, Koonin EV Genome Res 2002 Jun 12(6):962-8 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 24 Jul 2002 Generation of self-incompatible Arabidopsis thaliana by transfer of two S locus genes from A. lyrata. Nasrallah ME, Liu P, Nasrallah JB Science 2002 Jul 12 297(5579):247-9 [abstract on PubMed] [related articles] [FREE full text] Selected by | Neelima Sinha / Deborah Charlesworth / Chris Franklin / Thierry Gaude / David Baum Evaluated 24 Jul 2002 Male-driven evolution of mitochondrial and chloroplastidial DNA sequences in plants. Whittle CA, Johnston MO Mol Biol Evol 2002 Jun 19(6):938-49 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 11 Jun 2002 Inbreeding depression: tests of the overdominance and partial dominance hypotheses. Roff DA Evolution Int J Org Evolution 2002 Apr 56(4):768-75 [abstract on PubMed] [related articles] [order article] Selected by | Deborah Charlesworth Evaluated 11 Jun 2002 Molecular characterization of meiotic recombination across the 140-kb multigenic a1-sh2 interval of maize. Yao H, Zhou Q, …, Nikolau BJ, Schnable PS Proc Natl Acad Sci U S A 2002 Apr 30 99(9):6157-62 [abstract on PubMed] [related articles] [FREE full text] Selected by | Peter Langridge / Deborah Charlesworth Evaluated 7 Jun 2002 Homozygosity and linkage disequilibrium. Sabatti C, Risch N Genetics 2002 Apr 160(4):1707-19 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 7 Jun 2002 RAPD isolation of a Y chromosome specific ORF in a dioecious plant, Silene latifolia. Nakao S, Matsunaga S, …, Kuroiwa T, Kawano S Genome 2002 Apr 45(2):413-20 [abstract on PubMed] [related articles] [order article] Selected by | Deborah Charlesworth Evaluated 13 May 2002 Genetic structure of the mating-type locus of Chlamydomonas reinhardtii. Ferris PJ, Armbrust EV, Goodenough UW Genetics 2002 Jan 160(1):181-200 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 22 Apr 2002 Positive darwinian selection promotes heterogeneity among members of the antifreeze protein multigene family. Swanson WJ, Aquadro CF J Mol Evol 2002 Mar 54(3):403-10 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Deborah Charlesworth Evaluated 22 Apr 2002 Mapping of sex determination loci on the white campion (Silene latifolia) Y chromosome using amplified fragment length polymorphism. Lebel-Hardenack S, Hauser E, …, Schmid J, Grant SR Genetics 2002 Feb 160(2):717-25 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 14 Mar 2002 Genetic control of self-incompatibility in Anagallis monelli (Primulaceae: Myrsinaceae). Talavera S, Gibbs PE, Fernández-Piedra MP, Ortiz-Herrera MA Heredity 2001 Nov 87(Pt 5):589-97 [abstract on PubMed] [related articles] [order article] Selected by | Deborah Charlesworth Evaluated 14 Mar 2002 Interactions between natural selection, recombination and gene density in the genes of Drosophila. Hey J, Kliman RM Genetics 2002 Feb 160(2):595-608 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 14 Mar 2002 Chromosome painting in Arabidopsis thaliana. Lysak MA, Fransz PF, Ali HB, Schubert I Plant J 2001 Dec 28(6):689-97 [abstract on PubMed] [related articles] [order article] Selected by | Deborah Charlesworth Evaluated 13 Mar 2002 Monoallelic expression and dominance interactions in anthers of self-incompatible Arabidopsis lyrata. Kusaba M, Tung CW, Nasrallah ME, Nasrallah JB Plant Physiol 2002 Jan 128(1):17-20 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 6 Feb 2002 Differential divergence of three human pseudoautosomal genes and their mouse homologs: implications for sex chromosome evolution. Gianfrancesco F, Sanges R, …, Forabosco A, D'Urso M Genome Res 2001 Dec 11(12):2095-100 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 9 Jan 2002 Genomic characterization of recent human LINE-1 insertions: evidence supporting random insertion. Ovchinnikov I, Troxel AB, Swergold GD Genome Res 2001 Dec 11(12):2050-8 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 8 Jan 2002 Comparative genomics between rice and Arabidopsis shows scant collinearity in gene order. Liu H, Sachidanandam R, Stein L Genome Res 2001 Dec 11(12):2020-6 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth / Klaus Mayer Evaluated 7 Jan 2002 Most of the human genome is transcribed. Wong GK, Passey DA, Yu J Genome Res 2001 Dec 11(12):1975-7 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 3 Jan 2002 Abundance, distribution, and transcriptional activity of repetitive elements in the maize genome. Meyers BC, Tingey SV, Morgante M Genome Res 2001 Oct 11(10):1660-76 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth / Renate Schmidt Evaluated 28 Nov 2001 High genetic load in the Pacific oyster Crassostrea gigas. Launey S, Hedgecock D Genetics 2001 Sep 159(1):255-65 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 13 Nov 2001 Allele-specific receptor-ligand interactions in Brassica self-incompatibility. Kachroo A, Schopfer CR, Nasrallah ME, Nasrallah JB Science 2001 Sep 7 293(5536):1824-6 [abstract on PubMed] [related articles] [FREE full text] Selected by | Sheila McCormick / Thierry Gaude / Deborah Charlesworth / Chris Franklin / Laurie Smith Evaluated 5 Oct 2001 Sex-chromosomal differentiation and amelogenin genes in mammals. Iwase M, Satta Y, Takahata N Mol Biol Evol 2001 Aug 18(8):1601-3 [abstract on PubMed] [related articles] [FREE full text] Selected by | Deborah Charlesworth Evaluated 2 Oct 2001

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