1980 PhD, Cell Biology, University of Kansas

1980-1982 NIH postdoctoral associate: Washington University, St. Louis, Plant Molecular Biology

1982-present Research Scientist, Institute of Molecular Biology, Austrian Academy of Sciences, Salzburg, Austria. Research group co-led by my husband, Antonius Matzke, on plant gene silencing, nuclear membrane ion transporters, plant genome evolution

http://www.gmi.oeaw.ac.at/amatzke.htm

Hsp90 prevents phenotypic variation by suppressing the mutagenic activity of transposons. Specchia V, Piacentini L, …, Pimpinelli S, Bozzetti MP Nature 2010 Jan 10 [abstract on PubMed] [related articles] [full text] Selected by | Marjori Matzke Evaluated 1 Feb 2010 Mechanistic science. Casadevall A, Fang FC Infect Immun 2009 Sep 77(9):3517-9 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 7 Sep 2009 Transgenic multivitamin corn through biofortification of endosperm with three vitamins representing three distinct metabolic pathways. Naqvi S, Zhu C, …, Capell T, Christou P Proc Natl Acad Sci U S A 2009 May 12 106(19):7762-7 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 11 Jun 2009 RNA-directed DNA methylation requires an AGO4-interacting member of the SPT5 elongation factor family. Bies-Etheve N, Pontier D, …, Cooke R, Lagrange T EMBO Rep 2009 Apr 3 [abstract on PubMed] [related articles] [full text] Selected by | Marjori Matzke / Elizabeth Dennis Evaluated 8 Apr 2009 Origins and evolution of eukaryotic RNA interference. Shabalina SA, Koonin EV Trends Ecol Evol 2008 Aug 18 [abstract on PubMed] [related articles] [full text] Selected by | Marjori Matzke Evaluated 5 Sep 2008 Conifers have a unique small RNA silencing signature. Dolgosheina EV, Morin RD, …, Mattsson J, Unrau PJ RNA 2008 Jun 19 [abstract on PubMed] [related articles] [full text] Selected by | Marjori Matzke Evaluated 24 Jun 2008 Genetic analysis of Israel acute paralysis virus: distinct clusters are circulating in the United States. Palacios G, Hui J, …, Briese T, Lipkin WI J Virol 2008 Jul 82(13):6209-17 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 16 Jun 2008 A requirement for DICER to maintain full promoter CpG island hypermethylation in human cancer cells. Ting AH, Suzuki H, …, Tokino T, Baylin SB Cancer Res 2008 Apr 15 68(8):2570-5 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 22 Apr 2008 GADD45A does not promote DNA demethylation. Jin SG, Guo C, Pfeifer GP PLoS Genet 2008 Mar 4(3):e1000013 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 25 Mar 2008 Unintentional miRNA Ablation is a Risk Factor in Gene Knockout Studies: A Short Report. Osokine I, Hsu R, Loeb GB, McManus MT PLoS Genet 2008 Feb 15 4:e34 [abstract on PubMed] [related articles] [FREE full text] Selected by | Isaac Kohane / Marjori Matzke Evaluated 26 Feb 2008 Developmental control in animals and a biological role for DNA charge transfer. Elson E Prog Biophys Mol Biol 2007 Sep-Nov 95(1-3):1-15 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 28 Jan 2008 Protein interactions: is seeing believing? Mackay JP, Sunde M, …, Crossley M, Matthews JM Trends Biochem Sci 2007 Dec 32(12):530-1 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 22 Nov 2007 A novel Snf2 protein maintains trans-generational regulatory states established by paramutation in maize. Hale CJ, Stonaker JL, Gross SM, Hollick JB PLoS Biol 2007 Oct 16 5(10):e275 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 16 Oct 2007 Pollen lethality: a phenomenon in Arabidopsis RNA interference plants. Xing S, Zachgo S Plant Physiol 2007 Oct 145(2):330-3 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 9 Oct 2007 Element biofortification: can mycorrhizas potentially offer a more effective and sustainable pathway to curb human malnutrition? He X, Nara K Trends Plant Sci 2007 Aug 12(8):331-3 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 5 Oct 2007 Carbodiimide-mediated cross-linking of RNA to nylon membranes improves the detection of siRNA, miRNA and piRNA by northern blot. Pall GS, Codony-Servat C, Ritchie L, Hamilton A Nucleic Acids Res 2007 35:60 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 21 Aug 2007 Promoter-associated RNA is required for RNA-directed transcriptional gene silencing in human cells. Han J, Kim D, Morris KV Proc Natl Acad Sci U S A 2007 Jul 24 104(30):12422-7 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Paul Kaufman Evaluated 19 Jul 2007 Control of DNA methylation and heterochromatic silencing by histone H2B deubiquitination. Sridhar VV, Kapoor A, …, Bressan RA, Zhu JK Nature 2007 Jun 7 447(7145):735-8 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke / Elizabeth Dennis / Alexander Krichevsky and Vitaly Citovsky Evaluated 12 Jun 2007 Origin and evolution of human microRNAs from transposable elements. Piriyapongsa J, Mariño-Ramírez L, Jordan IK Genetics 2007 Jun 176(2):1323-37 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 3 May 2007 Why are there still over 1000 uncharacterized yeast genes? Peña-Castillo L, Hughes TR Genetics 2007 May 176(1):7-14 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 30 Apr 2007 A structured viroid RNA serves as a substrate for dicer-like cleavage to produce biologically active small RNAs but is resistant to RNA-induced silencing complex-mediated degradation. Itaya A, Zhong X, …, Nelson RS, Ding B J Virol 2007 Mar 81(6):2980-94 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 16 Apr 2007 Role of Arabidopsis AGO6 in siRNA accumulation, DNA methylation and transcriptional gene silencing. Zheng X, Zhu J, Kapoor A, Zhu JK EMBO J 2007 Mar 21 26(6):1691-701 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 5 Mar 2007 Dnmt2 functions in the cytoplasm to promote liver, brain, and retina development in zebrafish. Rai K, Chidester S, …, Jones DA, Cairns BR Genes Dev 2007 Feb 1 21(3):261-6 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 19 Feb 2007 A multistep process gave rise to RNA polymerase IV of land plants. Luo J, Hall BD J Mol Evol 2007 Jan 64(1):101-12 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 29 Jan 2007 Four plant Dicers mediate viral small RNA biogenesis and DNA virus induced silencing. Blevins T, Rajeswaran R, …, Hohn T, Pooggin MM Nucleic Acids Res 2006 34(21):6233-46 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 21 Nov 2006 Plant genetics: increased outcrossing in hothead mutants. Peng P, Chan SW, Shah GA, Jacobsen SE Nature 2006 Sep 28 443(7110):E8; discussion E8-9 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke / Christian Hardtke Evaluated 2 Oct 2006 Gene expression: long-term gene silencing by RNAi. Vastenhouw NL, Brunschwig K, …, Tijsterman M, Plasterk RH Nature 2006 Aug 24 442(7105):882 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke / Nektarios Tavernarakis Evaluated 1 Sep 2006 Whole genome RNAi screens for increased longevity: important new insights but not the whole story. Lee SS Exp Gerontol 2006 Oct 41(10):968-73 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 15 Aug 2006 Active cytosine demethylation triggered by a nuclear receptor involves DNA strand breaks. Kress C, Thomassin H, Grange T Proc Natl Acad Sci U S A 2006 Jul 25 103(30):11112-7 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 18 Jul 2006 Swi6/HP1 recruits a JmjC domain protein to facilitate transcription of heterochromatic repeats. Zofall M, Grewal SI Mol Cell 2006 Jun 9 22(5):681-92 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke / Francis Stewart / Daniel Reines Evaluated 15 Jun 2006 Is RNA interference involved in intrinsic antiviral immunity in mammals? Cullen BR Nat Immunol 2006 Jun 7(6):563-7 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 31 May 2006 The assembly and maintenance of heterochromatin initiated by transgene repeats are independent of the RNA interference pathway in mammalian cells. Wang F, Koyama N, …, Reith W, Tsukamoto T Mol Cell Biol 2006 Jun 26(11):4028-40 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 25 May 2006 DEMETER and REPRESSOR OF SILENCING 1 encode 5-methylcytosine DNA glycosylases. Morales-Ruiz T, Ortega-Galisteo AP, …, Ariza RR, Roldán-Arjona T Proc Natl Acad Sci U S A 2006 May 2 103(18):6853-8 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 26 Apr 2006 Molecular cytogenetics and allotetraploidy in the red vizcacha rat, Tympanoctomys barrerae (Rodentia, Octodontidae). Gallardo MH, González CA, Cebrián I Genomics 2006 Aug 88(2):214-21 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 10 Apr 2006 Genetic and biochemical evidence for involvement of HOTHEAD in the biosynthesis of long-chain alpha-,omega-dicarboxylic fatty acids and formation of extracellular matrix. Kurdyukov S, Faust A, …, Saedler H, Yephremov A Planta 2006 Jul 224(2):315-29 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 20 Mar 2006 Prelamin A and lamin A appear to be dispensable in the nuclear lamina. Fong LG, Ng JK, …, Bergo MO, Young SG J Clin Invest 2006 Mar 116(3):743-52 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Yosef Gruenbaum Evaluated 7 Mar 2006 RNA silencing in Chlamydomonas: mechanisms and tools. Schroda M Curr Genet 2006 Feb 49(2):69-84 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 14 Feb 2006 Comparative analysis of cancer genes in the human and chimpanzee genomes. Puente XS, Velasco G, …, King MC, López-Otín C BMC Genomics 2006 7:15 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 1 Feb 2006 Methylation of tRNAAsp by the DNA methyltransferase homolog Dnmt2. Goll MG, Kirpekar F, …, Jacobsen SE, Bestor TH Science 2006 Jan 20 311(5759):395-8 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Xiaodong Cheng Evaluated 23 Jan 2006 Identification by full-coverage array CGH of human DNA copy number increases relative to chimpanzee and gorilla. Wilson GM, Flibotte S, …, Clark AG, Holt RA Genome Res 2006 Feb 16(2):173-81 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 6 Jan 2006 Deletion of Peg10, an imprinted gene acquired from a retrotransposon, causes early embryonic lethality. Ono R, Nakamura K, …, Kaneko-Ishino T, Ishino F Nat Genet 2006 Jan 38(1):101-6 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 6 Jan 2006 An index to quantify an individual's scientific research output. Hirsch JE Proc Natl Acad Sci U S A 2005 Nov 15 102(46):16569-72 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Charles Auffray Evaluated 11 Nov 2005 EGO-1, a putative RNA-dependent RNA polymerase, is required for heterochromatin assembly on unpaired dna during C. elegans meiosis. Maine EM, Hauth J, …, She X, Kelly WG Curr Biol 2005 Nov 8 15(21):1972-8 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke / Susan Mango Evaluated 11 Nov 2005 Inhibiting gene expression at transcription start sites in chromosomal DNA with antigene RNAs. Janowski BA, Huffman KE, …, Minna JD, Corey DR Nat Chem Biol 2005 Sep 1(4):216-22 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke / Oliver Weichenrieder Evaluated 27 Oct 2005 Overexpression of an Arabidopsis thaliana ABC transporter confers kanamycin resistance to transgenic plants. Mentewab A, Stewart CN Nat Biotechnol 2005 Sep 23(9):1177-80 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 11 Oct 2005 The star-type color pattern in Petunia hybrida 'red Star' flowers is induced by sequence-specific degradation of chalcone synthase RNA. Koseki M, Goto K, Masuta C, Kanazawa A Plant Cell Physiol 2005 Nov 46(11):1879-83 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 22 Sep 2005 Why most published research findings are false. Ioannidis JP PLoS Med 2005 Aug 2(8):e124 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Andreas Wagner / Charles Auffray / Andrew Hector Dissenters | David Sassoon Author Response | John Ioannidis Evaluated 8 Sep 2005 Search for a prion-specific nucleic acid. Safar JG, Kellings K, …, Prusiner SB, Riesner D J Virol 2005 Aug 79(16):10796-806 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Charles Auffray Evaluated 2 Aug 2005 An Arabidopsis hAT-like transposase is essential for plant development. Bundock P, Hooykaas P Nature 2005 Jul 14 436(7048):282-4 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 26 Jul 2005 Short double-stranded RNA induces transcriptional gene silencing in human cancer cells in the absence of DNA methylation. Ting AH, Schuebel KE, Herman JG, Baylin SB Nat Genet 2005 Aug 37(8):906-10 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke / Frank Lyko / Barbara Trask Evaluated 22 Jul 2005 The Putative RNA-dependent RNA polymerase RDR6 acts synergistically with ASYMMETRIC LEAVES1 and 2 to repress BREVIPEDICELLUS and MicroRNA165/166 in Arabidopsis leaf development. Li H, Xu L, …, Xu Y, Huang H Plant Cell 2005 Aug 17(8):2157-71 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 14 Jul 2005 RNA polymerase II is required for RNAi-dependent heterochromatin assembly. Kato H, Goto DB, …, Furukawa K, Murakami Y Science 2005 Jul 15 309(5733):467-9 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 15 Jun 2005 Activation-induced cytidine deaminase deaminates 5-methylcytosine in DNA and is expressed in pluripotent tissues: implications for epigenetic reprogramming. Morgan HD, Dean W, …, Reik W, Petersen-Mahrt SK J Biol Chem 2004 Dec 10 279(50):52353-60 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 1 Jun 2005 T cell lineage choice and differentiation in the absence of the RNase III enzyme Dicer. Cobb BS, Nesterova TB, …, Smale ST, Merkenschlager M J Exp Med 2005 May 2 201(9):1367-73 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 13 May 2005 Molecular and cytogenetic characterization of site-specific repetitive DNA sequences in the Chinese soft-shelled turtle (Pelodiscus sinensis, Trionychidae). Yamada K, Nishida-Umehara C, Matsuda Y Chromosome Res 2005 13(1):33-46 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 27 Apr 2005 A two-edged role for the transposable element Kiddo in the rice ubiquitin2 promoter. Yang G, Lee YH, …, Kertbundit S, Hall TC Plant Cell 2005 May 17(5):1559-68 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 12 Apr 2005 Functional genomic analysis of RNA interference in C. elegans. Kim JK, Gabel HW, …, Vidal M, Ruvkun G Science 2005 May 20 308(5725):1164-7 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 4 Apr 2005 Molecular cytogenetics discards polyploidy in mammals. Svartman M, Stone G, Stanyon R Genomics 2005 Apr 85(4):425-30 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 4 Apr 2005 Genome-wide non-mendelian inheritance of extra-genomic information in Arabidopsis. Lolle SJ, Victor JL, Young JM, Pruitt RE Nature 2005 Mar 24 434(7032):505-9 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Frank Lyko / Shigeru Iida / Kay Schneitz / Judy Wall / Marjori Matzke / James Carrington / Jose Luis Riechmann / Christian Hardtke / John Bowman / James Hu / Caren Chang / Venkatesan Sundaresan / Philip Benfey / Stephan Beck / Magnus Nordborg / Neelima Sinha / Martin Parniske / Elena Alvarez-Buylla / Elizabeth Kellogg / Elizabeth Hood Dissenters | Alejandro Sanchez-Alvarado Evaluated 31 Mar 2005 Transcriptional silencing of a transgene by RNAi in the soma of C. elegans. Grishok A, Sinskey JL, Sharp PA Genes Dev 2005 Mar 15 19(6):683-96 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 8 Mar 2005 Specific and potent RNAi in the nucleus of human cells. Robb GB, Brown KM, Khurana J, Rana TM Nat Struct Mol Biol 2005 Feb 12(2):133-7 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 14 Feb 2005 The Arabidopsis HOMOLOGY-DEPENDENT GENE SILENCING1 gene codes for an S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing. Rocha PS, Sheikh M, …, Vaucheret H, Furner I Plant Cell 2005 Feb 17(2):404-17 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 25 Jan 2005 Global effects on gene expression in fission yeast by silencing and RNA interference machineries. Hansen KR, Burns G, …, Bähler J, Thon G Mol Cell Biol 2005 Jan 25(2):590-601 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 11 Jan 2005 Who gets acknowledged: measuring scientific contributions through automatic acknowledgment indexing. Giles CL, Councill IG Proc Natl Acad Sci U S A 2004 Dec 21 101(51):17599-604 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 5 Jan 2005 Structural and functional analysis of a 0.5-Mb chicken region orthologous to the imprinted mammalian Ascl2/Mash2-Igf2-H19 region. Yokomine T, Shirohzu H, …, Sakaki Y, Sasaki H Genome Res 2005 Jan 15(1):154-65 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 22 Dec 2004 Evolution of dnmt-2 and mbd-2-like genes in the free-living nematodes Pristionchus pacificus, Caenorhabditis elegans and Caenorhabditis briggsae. Gutierrez A, Sommer RJ Nucleic Acids Res 2004 32(21):6388-96 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 14 Dec 2004 The Drosophila MBD2/3 protein mediates interactions between the MI-2 chromatin complex and CpT/A-methylated DNA. Marhold J, Kramer K, Kremmer E, Lyko F Development 2004 Dec 131(24):6033-9 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 25 Nov 2004 MicroRNA binding sites in Arabidopsis class III HD-ZIP mRNAs are required for methylation of the template chromosome. Bao N, Lye KW, Barton MK Dev Cell 2004 Nov 7(5):653-62 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Miltos Tsiantis / Marjori Matzke / Vivian Irish / Robert Sablowski Evaluated 22 Nov 2004 Reconstruction of putative DNA virus from endogenous rice tungro bacilliform virus-like sequences in the rice genome: implications for integration and evolution. Kunii M, Kanda M, …, Kishima Y, Sano Y BMC Genomics 2004 Oct 18 5(1):80 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 21 Oct 2004 Constitutional aneuploidy and cancer predisposition caused by biallelic mutations in BUB1B. Hanks S, Coleman K, …, Douglas J, Rahman N Nat Genet 2004 Nov 36(11):1159-61 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke / Kevin Hardwick / Domenico Grieco / Prasad Jallepalli Evaluated 19 Oct 2004 A large imprinted microRNA gene cluster at the mouse Dlk1-Gtl2 domain. Seitz H, Royo H, …, Ferguson-Smith AC, Cavaillé J Genome Res 2004 Sep 14(9):1741-8 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 30 Sep 2004 MicroRNA genes are transcribed by RNA polymerase II. Lee Y, Kim M, …, Baek SH, Kim VN EMBO J 2004 Oct 13 23(20):4051-60 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Benoit Coulombe / Elsebet Lund Evaluated 21 Sep 2004 Arabidopsis micro-RNA biogenesis through Dicer-like 1 protein functions. Kurihara Y, Watanabe Y Proc Natl Acad Sci U S A 2004 Aug 24 101(34):12753-8 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / James Carrington / Motoaki Seki Evaluated 23 Aug 2004 Argonaute2 is the catalytic engine of mammalian RNAi. Liu J, Carmell MA, …, Joshua-Tor L, Hannon GJ Science 2004 Sep 3 305(5689):1437-41 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Daniel Gallie / Fritz Eckstein / Miles Wilkinson / Richard Carthew Evaluated 4 Aug 2004 The C. elegans Polycomb gene SOP-2 encodes an RNA binding protein. Zhang H, Christoforou A, …, van den Heuvel S, Haber DA Mol Cell 2004 Jun 18 14(6):841-7 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 28 Jun 2004 Ultraconserved elements in the human genome. Bejerano G, Pheasant M, …, Mattick JS, Haussler D Science 2004 May 28 304(5675):1321-5 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Deborah Charlesworth / Richard L Stevens / Golan Yona Evaluated 7 Jun 2004 Retrotransposon-induced mutations in grape skin color. Kobayashi S, Goto-Yamamoto N, Hirochika H Science 2004 May 14 304(5673):982 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 21 May 2004 Conservation of DNA methylation in dipteran insects. Marhold J, Rothe N, …, Brueckner B, Lyko F Insect Mol Biol 2004 Apr 13(2):117-23 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 16 Apr 2004 Redundancy of the two dicer genes in transgene-induced posttranscriptional gene silencing in Neurospora crassa. Catalanotto C, Pallotta M, …, Macino G, Cogoni C Mol Cell Biol 2004 Mar 24(6):2536-45 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 1 Apr 2004 Differences in DNA methylation patterns between humans and chimpanzees. Enard W, Fassbender A, …, Pääbo S, Olek A Curr Biol 2004 Feb 17 14(4):R148-9 [abstract on PubMed] [related articles] [order article] Selected by | Marjori Matzke Evaluated 3 Mar 2004 A conserved siRNA-degrading RNase negatively regulates RNA interference in C. elegans. Kennedy S, Wang D, Ruvkun G Nature 2004 Feb 12 427(6975):645-9 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke / Amy Pasquinelli / Julie Ahringer Evaluated 18 Feb 2004 RNA leaching of transcription factors disrupts transcription in myotonic dystrophy. Ebralidze A, Wang Y, …, Ebralidse K, Junghans RP Science 2004 Jan 16 303(5656):383-7 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Jim Maher Evaluated 6 Feb 2004 Preferential de novo methylation of cytosine residues in non-CpG sequences by a domains rearranged DNA methyltransferase from tobacco plants. Wada Y, Ohya H, …, Koizumi N, Sano H J Biol Chem 2003 Oct 24 278(43):42386-93 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 21 Jan 2004 Meiotic pairing and imprinted X chromatin assembly in Caenorhabditis elegans. Bean CJ, Schaner CE, Kelly WG Nat Genet 2004 Jan 36(1):100-5 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke / Robert K Herman Evaluated 7 Jan 2004 Structure and nucleic-acid binding of the Drosophila Argonaute 2 PAZ domain. Lingel A, Simon B, Izaurralde E, Sattler M Nature 2003 Nov 27 426(6965):465-9 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke / Robert Dutnall Evaluated 24 Nov 2003 Deletion derivatives of the MuDR regulatory transposon of maize encode antisense transcripts but are not dominant-negative regulators of mutator activities. Kim SH, Walbot V Plant Cell 2003 Oct 15(10):2430-47 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Renate Schmidt Evaluated 27 Oct 2003 The Arabidopsis heterochronic gene ZIPPY is an ARGONAUTE family member. Hunter C, Sun H, Poethig RS Curr Biol 2003 Sep 30 13(19):1734-9 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Richard M Amasino Evaluated 13 Oct 2003 The two faces of Alba: the evolutionary connection between proteins participating in chromatin structure and RNA metabolism. Aravind L, Iyer LM, Anantharaman V Genome Biol 2003 4(10):R64 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 22 Sep 2003 Nuclear membrane proteins with potential disease links found by subtractive proteomics. Schirmer EC, Florens L, …, Yates JR, Gerace L Science 2003 Sep 5 301(5638):1380-2 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Karin Romisch / Steven Gygi Evaluated 9 Sep 2003 The small RNA profile during Drosophila melanogaster development. Aravin AA, Lagos-Quintana M, …, Meyer J, Tuschl T Dev Cell 2003 Aug 5(2):337-50 [abstract on PubMed] [related articles] [order article] Selected by | Ken Irvine / Marjori Matzke / Frank Lyko Evaluated 22 Aug 2003 Computational approaches to identify promoters and cis-regulatory elements in plant genomes. Rombauts S, Florquin K, …, Rouzé P, van de Peer Y Plant Physiol 2003 Jul 132(3):1162-76 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 11 Aug 2003 Asymmetrical distribution of Neisseria miniature insertion sequence DNA repeats among pathogenic and nonpathogenic Neisseria strains. De Gregorio E, Abrescia C, Carlomagno MS, Di Nocera PP Infect Immun 2003 Jul 71(7):4217-21 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 30 Jul 2003 Generation of Ski-knockdown mice by expressing a long double-strand RNA from an RNA polymerase II promoter. Shinagawa T, Ishii S Genes Dev 2003 Jun 1 17(11):1340-5 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 2 Jul 2003 MicroRNAs and other tiny endogenous RNAs in C. elegans. Ambros V, Lee RC, …, Williams PT, Jewell D Curr Biol 2003 May 13 13(10):807-18 [abstract on PubMed] [related articles] [order article] Selected by | Jonathan Hodgkin / Marjori Matzke Evaluated 23 Jun 2003 Transcriptional silencing of geminiviral promoter-driven transgenes following homologous virus infection. Seemanpillai M, Dry I, Randles J, Rezaian A Mol Plant Microbe Interact 2003 May 16(5):429-38 [abstract on PubMed] [related articles] [order article] Selected by | Marjori Matzke Evaluated 16 Jun 2003 ATX-1, an Arabidopsis homolog of trithorax, activates flower homeotic genes. Alvarez-Venegas R, Pien S, …, Grossniklaus U, Avramova Z Curr Biol 2003 Apr 15 13(8):627-37 [abstract on PubMed] [related articles] [order article] Selected by | Marjori Matzke Evaluated 5 Jun 2003 A progeroid syndrome in mice is caused by defects in A-type lamins. Mounkes LC, Kozlov S, …, Sullivan T, Stewart CL Nature 2003 May 15 423(6937):298-301 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke / Brendan Lee Evaluated 27 May 2003 Regulation of calcium signals in the nucleus by a nucleoplasmic reticulum. Echevarría W, Leite MF, …, Zipfel WR, Nathanson MH Nat Cell Biol 2003 May 5(5):440-6 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Antony Galione / Marjori Matzke Evaluated 16 May 2003 The genome sequence of the filamentous fungus Neurospora crassa. Galagan JE, Calvo SE, …, Nusbaum C, Birren B Nature 2003 Apr 24 422(6934):859-68 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke / James Carrington / Miguel Penalva Evaluated 7 May 2003 Widespread occurrence of antisense transcription in the human genome. Yelin R, Dahary D, …, Savitsky K, Rotman G Nat Biotechnol 2003 Apr 21(4):379-86 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Richard L Stevens / Marjori Matzke Evaluated 16 Apr 2003 P1/HC-Pro, a viral suppressor of RNA silencing, interferes with Arabidopsis development and miRNA unction. Kasschau KD, Xie Z, …, Krizan KA, Carrington JC Dev Cell 2003 Feb 4(2):205-17 [abstract on PubMed] [related articles] [order article] Selected by | Jim Smiley / Marjori Matzke Evaluated 7 Apr 2003 Vertebrate microRNA genes. Lim LP, Glasner ME, …, Burge CB, Bartel DP Science 2003 Mar 7 299(5612):1540 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Jonathan Hodgkin Evaluated 24 Mar 2003 The transcriptional activity of human Chromosome 22. Rinn JL, Euskirchen G, …, Weissman S, Snyder M Genes Dev 2003 Feb 15 17(4):529-40 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 17 Mar 2003 A sequence-based map of Arabidopsis genes with mutant phenotypes. Meinke DW, Meinke LK, …, Mueller LA, Tzafrir I Plant Physiol 2003 Feb 131(2):409-18 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 3 Mar 2003 Origin of a substantial fraction of human regulatory sequences from transposable elements. Jordan IK, Rogozin IB, Glazko GV, Koonin EV Trends Genet 2003 Feb 19(2):68-72 [abstract on PubMed] [related articles] [order article] Selected by | Marie-Angele Grandbastien / Marjori Matzke Evaluated 25 Feb 2003 RNAi targeting of DNA virus in plants. Pooggin M, Shivaprasad PV, Veluthambi K, Hohn T Nat Biotechnol 2003 Feb 21(2):131-2 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 12 Feb 2003 A biochemical framework for RNA silencing in plants. Tang G, Reinhart BJ, Bartel DP, Zamore PD Genes Dev 2003 Jan 1 17(1):49-63 [abstract on PubMed] [related articles] [FREE full text] Selected by | James Carrington / Marjori Matzke / Martin Parniske Evaluated 3 Feb 2003 ROS1, a repressor of transcriptional gene silencing in Arabidopsis, encodes a DNA glycosylase/lyase. Gong Z, Morales-Ruiz T, …, David L, Zhu JK Cell 2002 Dec 13 111(6):803-14 [abstract on PubMed] [related articles] [order article] Selected by | Vivian Irish / Marjori Matzke / Motoaki Seki Evaluated 23 Jan 2003 Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat. Kashkush K, Feldman M, Levy AA Nat Genet 2003 Jan 33(1):102-6 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke / Renate Schmidt Evaluated 23 Jan 2003 Direct interaction with a nuclear protein and regulation of gene silencing by a variant of the Ca2+-channel beta 4 subunit. Hibino H, Pironkova R, …, Hudspeth AJ, Lesage F Proc Natl Acad Sci U S A 2003 Jan 7 100(1):307-12 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Annette Dolphin Evaluated 14 Jan 2003 Origin of an apparent B chromosome by mutation, chromosome fragmentation and specific DNA sequence amplification. Dhar MK, Friebe B, Koul AK, Gill BS Chromosoma 2002 Dec 111(5):332-40 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 2 Jan 2003 Receptor usage and fetal expression of ovine endogenous betaretroviruses: implications for coevolution of endogenous and exogenous retroviruses. Spencer TE, Mura M, …, Griebel PJ, Palmarini M J Virol 2003 Jan 77(1):749-53 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 2 Jan 2003 Chromosomes are predominantly located randomly with respect to each other in interphase human cells. Cornforth MN, Greulich-Bode KM, …, Hlatky L, Brenner DJ J Cell Biol 2002 Oct 28 159(2):237-44 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 12 Dec 2002 A novel mitochondrial protein, Tar1p, is encoded on the antisense strand of the nuclear 25S rDNA. Coelho PS, Bryan AC, …, Shadel GS, Snyder M Genes Dev 2002 Nov 1 16(21):2755-60 [abstract on PubMed] [related articles] [FREE full text] Selected by | David Brow / Marjori Matzke Evaluated 2 Dec 2002 Two chloroplastic viroids induce the accumulation of small RNAs associated with posttranscriptional gene silencing. Martínez de Alba AE, Flores R, Hernández C J Virol 2002 Dec 76(24):13094-6 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 22 Nov 2002 An ATP-gated ion channel at the cell nucleus. Atkinson L, Milligan CJ, Buckley NJ, Deuchars J Nature 2002 Nov 7 420(6911):42 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke / Hilmar Bading Evaluated 12 Nov 2002 Interphase chromosomes in Arabidopsis are organized as well defined chromocenters from which euchromatin loops emanate. Fransz P, De Jong JH, …, Castiglione MR, Schubert I Proc Natl Acad Sci U S A 2002 Oct 29 99(22):14584-9 [abstract on PubMed] [related articles] [FREE full text] Selected by | Steven Spiker / Gregory Copenhaver / Marjori Matzke / Chris Franklin Evaluated 5 Nov 2002 Dnmt3L is a transcriptional repressor that recruits histone deacetylase. Deplus R, Brenner C, …, de Launoit Y, Fuks F Nucleic Acids Res 2002 Sep 1 30(17):3831-8 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 25 Oct 2002 Establishment and maintenance of a heterochromatin domain. Hall IM, Shankaranarayana GD, …, Cohen A, Grewal SI Science 2002 Sep 27 297(5590):2232-7 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 16 Oct 2002 Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA. Llave C, Xie Z, Kasschau KD, Carrington JC Science 2002 Sep 20 297(5589):2053-6 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Philip Benfey / Daniel Gallie / Takashi Hirayama / Robert Sablowski / Javier Paz-Ares Evaluated 30 Sep 2002 Movement of potato spindle tuber viroid reveals regulatory points of phloem-mediated RNA traffic. Zhu Y, Qi Y, …, Owens R, Ding B Plant Physiol 2002 Sep 130(1):138-46 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Guenter Theissen Evaluated 16 Sep 2002 Two classes of short interfering RNA in RNA silencing. Hamilton A, Voinnet O, Chappell L, Baulcombe D EMBO J 2002 Sep 2 21(17):4671-9 [abstract on PubMed] [related articles] [order article] Selected by | James Carrington / Marjori Matzke Evaluated 10 Sep 2002 CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana. Park W, Li J, …, Messing J, Chen X Curr Biol 2002 Sep 3 12(17):1484-95 [abstract on PubMed] [related articles] [order article] Selected by | Marjori Matzke / Mark Running / Liam Dolan Evaluated 3 Sep 2002 MicroRNA maturation: stepwise processing and subcellular localization. Lee Y, Jeon K, …, Kim S, Kim VN EMBO J 2002 Sep 2 21(17):4663-70 [abstract on PubMed] [related articles] [order article] Selected by | Marjori Matzke Evaluated 2 Sep 2002 Nuclear KATP channels trigger nuclear Ca(2+) transients that modulate nuclear function. Quesada I, Rovira JM, …, Nadal A, Soria B Proc Natl Acad Sci U S A 2002 Jul 9 99(14):9544-9 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 20 Aug 2002 Differential chromatin structure within a tandem array 100 kb upstream of the maize b1 locus is associated with paramutation. Stam M, Belele C, Dorweiler JE, Chandler VL Genes Dev 2002 Aug 1 16(15):1906-18 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Elizabeth Kellogg / Thomas Mitchell-Olds Evaluated 16 Aug 2002 Prediction of plant microRNA targets. Rhoades MW, Reinhart BJ, …, Bartel B, Bartel DP Cell 2002 Aug 23 110(4):513-20 [abstract on PubMed] [related articles] [order article] Selected by | Marjori Matzke / Philip Benfey / James Carrington / Gregory Copenhaver / Richard M Amasino / Liam Dolan / Javier Paz-Ares Evaluated 6 Aug 2002 The abundant class of nemis repeats provides RNA substrates for ribonuclease III in Neisseriae. De Gregorio E, Abrescia C, Carlomagno MS, Di Nocera PP Biochim Biophys Acta 2002 Jun 7 1576(1-2):39-44 [abstract on PubMed] [related articles] [order article] Selected by | Marjori Matzke Evaluated 11 Jun 2002 A cytosine methyltransferase homologue is essential for repeat-induced point mutation in Neurospora crassa. Freitag M, Williams RL, Kothe GO, Selker EU Proc Natl Acad Sci U S A 2002 Jun 25 99(13):8802-7 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / David Catcheside Evaluated 25 Jun 2002 Endogenous and silencing-associated small RNAs in plants. Llave C, Kasschau KD, Rector MA, Carrington JC Plant Cell 2002 Jul 14(7):1605-19 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke / Daniel Gallie / Philip Benfey Evaluated 25 Jun 2002 A viral protein suppresses RNA silencing and binds silencing-generated, 21- to 25-nucleotide double-stranded RNAs. Silhavy D, Molnár A, …, Tavazza M, Burgyán J EMBO J 2002 Jun 17 21(12):3070-80 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 24 Jun 2002 Gene loss, silencing and activation in a newly synthesized wheat allotetraploid. Kashkush K, Feldman M, Levy AA Genetics 2002 Apr 160(4):1651-9 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marie-Angele Grandbastien / Marjori Matzke Evaluated 5 Jun 2002 Induction and suppression of RNA silencing by an animal virus. Li H, Li WX, Ding SW Science 2002 May 17 296(5571):1319-21 [abstract on PubMed] [related articles] [FREE full text] Selected by | Daniel Gallie / Marjori Matzke / James Carrington / Dinah Singer Evaluated 27 May 2002 miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs. Mourelatos Z, Dostie J, …, Mann M, Dreyfuss G Genes Dev 2002 Mar 15 16(6):720-8 [abstract on PubMed] [related articles] [FREE full text] Selected by | A. Gregory Matera / Marjori Matzke Evaluated 25 Apr 2002 Using RNA interference to identify genes required for RNA interference. Dudley NR, Labbé JC, Goldstein B Proc Natl Acad Sci U S A 2002 Apr 2 99(7):4191-6 [abstract on PubMed] [related articles] [FREE full text] Selected by | Jonathan Hodgkin / Marjori Matzke Evaluated 10 Apr 2002 Enhancer action in trans is permitted throughout the Drosophila genome. Chen JL, Huisinga KL, …, Wu CT, Geyer PK Proc Natl Acad Sci U S A 2002 Mar 19 99(6):3723-8 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 2 Apr 2002 Meiotic silencing by unpaired DNA. Shiu PK, Raju NB, Zickler D, Metzenberg RL Cell 2001 Dec 28 107(7):905-16 [abstract on PubMed] [related articles] [order article] Selected by | Eric Selker / Marjori Matzke Evaluated 20 Mar 2002 Transcriptional cosuppression of yeast Ty1 retrotransposons. Jiang YW Genes Dev 2002 Feb 15 16(4):467-78 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 11 Mar 2002 RNAi related mechanisms affect both transcriptional and posttranscriptional transgene silencing in Drosophila. Pal-Bhadra M, Bhadra U, Birchler JA Mol Cell 2002 Feb 9(2):315-27 [abstract on PubMed] [related articles] [order article] Selected by | Marjori Matzke Evaluated 15 Feb 2002 Identification and analysis of Arabidopsis expressed sequence tags characteristic of non-coding RNAs. MacIntosh GC, Wilkerson C, Green PJ Plant Physiol 2001 Nov 127(3):765-76 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 15 Jan 2002 Chromosomal variation in neurons of the developing and adult mammalian nervous system. Rehen SK, McConnell MJ, …, Yang AH, Chun J Proc Natl Acad Sci U S A 2001 Nov 6 98(23):13361-6 [abstract on PubMed] [related articles] [FREE full text] Selected by | Marjori Matzke Evaluated 3 Jan 2002 Quality control of mRNA 3'-end processing is linked to the nuclear exosome. Hilleren P, McCarthy T, …, Parker R, Jensen TH Nature 2001 Oct 4 413(6855):538-42 [abstract on PubMed] [related articles] [full text] [order article] Selected by | Marjori Matzke Evaluated 22 Oct 2001 The fate of dsRNA in the nucleus: a p54(nrb)-containing complex mediates the nuclear retention of promiscuously A-to-I edited RNAs. Zhang Z, Carmichael GG Cell 2001 Aug 24 106(4):465-75 [abstract on PubMed] [related articles] [order article] Selected by | Marjori Matzke / Thomas Blumenthal / Brenda Bass Evaluated 28 Sep 2001

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